Publications
2013 - 2022
Andrés E. Marcoleta, Patricio Arros, Macarena A. Varasa, José Costa, Johanna Rojas-Salgado, Camilo Berríos-Pastén, Sofía Tapia-Fuentes, Daniel Silva, José Fierro, Nicolás Canales, Francisco P. Chávez, Alexis Gaete, Mauricio González, Miguel L. Allende, Rosalba Lagos. The highly diverse Antarctic Peninsula soil microbiota as a source of novel resistance genes. Science of The Total Environment, 810. doi.org/10.1016/j.scitotenv.2021.152003
Alex Di Genova, Gino Nardocci, Rodrigo Maldonado-Agurto, Christian Hodar, Camilo Valdivieso, Pamela Morales, Felipe Gajardo, Raquel Marina, Rodrigo A. Gutiérrez, Ariel Orellana, Verónica Cambiazo, Mauricio González, Álvaro Glavic, Marco A. Méndez, Alejandro Maass, Miguel L. Allende, Martin A. Montecino. Genome sequencing and transcriptomic analysis of the Andean killifish Orestias ascotanensis reveals adaptation to high-altitude aquatic life. Genomics, 114 (1). doi: 10.1016/j.ygeno.2021.12.018
Constanza Vásquez-Doorman, Javiera Escobedo, Miguel L. Allende. Current state of knowledge on freshwater planarians (Platyhelminthes, Tricladida, Dugesiidae) from Chile. Neotropical Biology and Conservation, 17 (3).
doi: 10.3897/neotropical.17.e82779
Daly Noll, Fabiola Leon, Debora Brandt, Pierre Pistorius, Céline Le Bohec, Francesco Bonadonna, Phil N. Trathan, Andrés Barbosa, Andrea Raya-Rey, Gisele P.M. Dantas, Rauri C.K. Bowie, Elie Poulin, Juliana A. Vianna. 2022. Positive selection on mitogenomes driving the diversification of gentoo penguins in response to adaptation in isolation. Scientific Reports, 12, 3767. doi.org/10.1038/s41598-022-07562-0
Fiddaman SR, Vinkler M, Levy H, Dimopoulos EA, Vianna JA, Cole TL, Pan H, Fang M, Zhang G, Frantz LA, Hart T, Smith AL. 2022. Positive selection and an incipient, genus-wide pseudogenization event in penguin Toll-like receptors. Molecular Biology and Evolution. doi: 10.1093/molbev/msab354
Di Cataldo, S., Cevidanes, A., Ulloa-Contreras, C., Cabello, J., Gambino, DeliaeGargano, V., Hidalgo-HermosoEzequiel, LatrofaMaria Stefania, Napolitano, C., Sacristán, I., Sallaberry-Pincheira, N., Vianna, J., Acosta-Jamett, G., Vicari D., Otranto, D., Millán, J. 2022. Large-scale survey for canine vector-borne parasites in free-ranging dogs and foxes from six diverse bioclimatic regions of Chile. Veterinary Parasitology: Regional Studies and Reports. VPRSR-D-21-00327R1
Rocío Álvarez-Varas, Carol Medrano, Hugo A Benítez, Felipe Guerrero, Fabiola León Miranda, Juliana A Vianna, Camila González, David Véliz. Genetics, Morphometrics and Health Characterization of Green Turtle Foraging Grounds in Mainland and Insular Chile. Animals, 12 (12) doi: 10.3390/ani12121473
Vera de Ferran, Henrique Vieira Figueiro´, Fernanda de Jesus Trindade, Oliver Smith, Mikkel-Holger S. Sinding, Cristine S. Trinca, Gabriele Zenato Lazzari, Geraldine Veron, Juliana A. Vianna, Filippo Barbanera, Sergei Kliver, Natalia Serdyukova, Tatiana Bulyonkova, Oliver A. Ryder, M. Thomas P. Gilbert, Klaus-Peter Koepfli, and Eduardo Eizirik. Phylogenomics of the world’s otters. Current Biology. https://doi.org/10.1016/j.cub.2022.06.036
Vivian C. Trevine, Felipe G. Grazziotin, Alejandro Giraudo, Nicole Sallaberry-Pinchera, Juliana A. Vianna, Hussam Zaher. The systematics of Tachymenini (Serpentes, Dipsadidae) an updated classification based on molecular and morphological evidence. Zoologica Scripta. doi: 10.1111/zsc.12565
Under Reveiw
Pertierra LR, Convey P, Barbosa A, Biersma EM, Chown SL, Cowan D, Diniz-Filho JAF, De los Rios A, Escribano-Álvarez, P., Fraser CI, Fontaneto D, Greve, M., Griffiths, HJ, Hughes KA, Lynch HJ, Ladle, R.J., Liu, XP., le Roux, PC, Majewska, R., Molina-Montenegro MA, Peck L, Quesada A, Ropert-Coudert Y, Sancho L, Terauds A, Vianna JA, Wilmotte A, Olalla-Tárraga MA, Hortal J. Frozen but lively: ecological research advances and knowledge gaps in terrestrial & freshwater Antarctic biodiversity science. Science.
Under Review
Julio, B. et al. Vianna J.A. Species delimitation for recent divergent species: incomplete lineage sorting, introgression or misidentification in culpeo and chilla foxes? Molecular Phylogenetics and Evolution.
Arroyo J.I., Díez B, Kempes C.P., West G.B., Marquet, P.A. A general theory for temperature-dependence in biology. Proceedings of the National Academy of Sciences. 119 (30): e2119872119. https://doi.org/10.1073/pnas.2119872119
Levicán, G.P., Muñoz-Villagrán, C., Grossolli-Gálvez, J., Acevedo-Arbunic, J., Vaelnzuela, X., Ferrer A., Díez, B. Characterization of two novel psychrotolerant Acidithiobacillus ferrooxidans strains from polar and subpolar environments. Front. Microbiol. doi: https://doi.org/10.3389/fmicb.2022.960324
Alcamán-Arias, M.E.; Cifuentes-Anticevic, J.; Castillo-Inaipil, W.; Farías, L.; Sanhueza, C.; Fernández-Gómez, B.; Verdugo, J.; Abarzua, L.; Ridley, C.; Tamayo-Leiva, J.; Díez, B. Dark diazotrophy during the Late Summer in SurfaceWaters of Chile Bay, West Antarctic Peninsula. Microorganisms. 10:1140. https://doi.org/10.3390/microorganisms10061140
Alcamán-Arias ME, Cifuentes-Anticevic J, Díez B, Testa G, Troncoso M, Bello E, Farías L. Surface Ammonia- Oxidizer Abundance During the Late Summer in the West Antarctic Coastal System. Frontiers Microbiology. 13:821902. doi: https://doi.org/10.3389/fmicb.2022.821902
JB. Ramond, K. Jordaan, B. Díez, SM. Heinzelmann, DA. Cowan. Microbial biogeochemical cycling of nitrogen in arid ecosystems. Microbiology and Molecular Biology Reviews. E00109-21. https://doi.org/10.1128/mmbr.00109-21
M Seeger, RJ Turner, M González. An exploration of microbial response to stressors with Prof. Claudio C. Vásquez Guzmán Biological Research 55 (1), 1-4. https://doi.org/10.1186/s40659-022-00393-3
P Aguila-Torres, M González, JE Maldonado, R Miranda, L Zhang, R González-Stegmaier, L A Rojas, A Gaete. Associations between bacterial communities and microplastics from surface seawater of the Northern Patagonian area of Chile. Environmental Pollution 306, 119313. https://doi.org/10.1016/j.envpol.2022.119313
A Gaete, C Andreani-Gerard, JE Maldonado, PA Muñoz-Torres, G F Sepúlveda-Chavera, M González. Bioprospecting of Plant Growth-Promoting Traits of Pseudomonas sp. Strain C3 Isolated from the Atacama Desert: Molecular and Culture-Based Analysis. Diversity 14 (5), 388. https://doi.org/10.3390/d14050388
JE Maldonado, A Gaete, D Mandakovic, C Aguado‐Norese, M Aguilar, RA Gutiérrez, M González. Partners to survive: Hoffmannseggia doellii root‐associated microbiome at the Atacama Desert. New Phytologist 234, 2126–2139. doi: https://doi.org/10.1111/nph.18080
B Battistoni, J Salazar, W Vega, D Valderrama-Soto, P Jiménez-Muñoz, A Sepúlveda-González, S Ahumada, I Cho, C S Gardana, H Morales, Á Peña-Neira, H Silva, J Maldonado, M González, R Infante, I Pacheco. An Upgraded, Highly Saturated Linkage Map of Japanese Plum (Prunus salicina Lindl.), and Identification of a New Major Locus Controlling the Flavan-3-ol Composition in Fruits. Frontiers in Plant Science 13, 805744. doi: 10.3389/fpls.2022.805744
H Temple, P Phyo, W Yang, JJ Lyczakowski, A Echevarría-Poza, I Yakunin, J P Parra-Rojas, O M Terrett, S Saez-Aguayo, R Dupree, A Orellana, M Hong, P Dupree. Golgi-localized putative S-adenosyl methionine transporters required for plant cell wall polysaccharide methylation. Nature Plants, 1-14. https://doi.org/10.1038/s41477-022-01156-4
LM De Almeida, S Cortes, M Vilensky, O Valenzuela, L Cortes-Sanabria, M de Souza, R A Barbeito, E Abdelhay, N Artagaveytia, A Daneri-Navarro, A S Llera, B Müller, O L Podhajcer, C Velazquez, E Alcoba, I Alonso, A I Bravo, N Camejo, D M Carraro, M Castro, S Cataldi, A Cayota, M Cerda, A Colombo, S Crocamo, A Del Toro-Arreola, R Delgadillo-Cristerna, L Delgado, M Dreyer Breitenbach, E Fernández, J Fernández, W Fernández, R A Franco-Topete, F Gaete, J Gómez, L P Gonzalez-Ramirez, M Guerrero, S A Gutierrez-Rubio, B Jalfin, A Lopez-Vazquez, D Loria, S Míguez, A de J Moran-Mendoza, G Morgan-Villela, C Mussetti, M A Nagai, A Oceguera-Villanueva, R M Reis, J Retamales, R Rodriguez, C Rosales, E Salas-Gonzalez, L Segovia, J M Sendoya, A A Silva-Garcia, S Viña, L Zagame, B Jones, M Szklo, United States-Latin American Cancer Research. Socioeconomic, Clinical, and Molecular Features of Breast Cancer Influence Overall Survival of Latin American Women
Frontiers in oncology 12. doi: 10.3389/fonc.2022.845527
S Donoso, L Jin, A Maass, Y Qiao. Directional mean dimension and continuum-wise expansive ℤ^{𝕜}-actions. Proceedings of the American Mathematical Society 150 (11), 4841–4853. https://doi.org/10.1090/proc/16027
B Espinoza, A Maass. On the automorphism group of minimal S-adic subshifts of finite alphabet rank. Ergodic Theory and Dynamical Systems 42 (9), 2800-282.
C Arancibia-Guerra, G Núñez-Lillo, A Cáceres-Mella, E Carrera, C Meneses, N Kuhn, R Pedreschi. Color desynchronization with softening of ‘Hass’ avocado: Targeted pigment, hormone and gene expression analysis. Postharvest Biology and Technology 194, 112067. https://doi.org/10.1016/j.postharvbio.2022.112067
I Balic, P Olmedo, B Zepeda, B Rojas, T Ejsmentewicz, M Barros, D Aguayo, AA Moreno, R Pedreschi, C Meneses, R Campos-Vargas. Metabolomic and biochemical analysis of mesocarp tissues from table grape berries with contrasting firmness reveals cell wall modifications associated to harvest and cold storage. Food Chemistry 389, 133052. https://doi.org/10.1016/j.foodchem.2022.133052
R Chirinos, K Ramon, M Mendoza, A Figueroa-Merma, A Pacheco-Ávalos, D Campos, R Pedreschi. Effect of Prolonged Cold Storage on the Dynamics of the Enzymatic and Non-Enzymatic Antioxidant System in the Mesocarp of Avocado (Persea americana) cv …
Horticulturae 8 (10), 880. https://doi.org/10.3390/horticulturae8100880
M Zegarra, A Aguilar-Galvez, R Chirinos, D Garcia-Rios, M Calsin, R Pedreschi, D Campos. Acrylamide mitigation in potato chips by addition of polyphenols from Inca muna (Chenopodium bolivianum). QUIMICA NOVA.
M Cisneros-Yupanqui, R Pedreschi, A Aguilar-Galvez, R Chirinos, D Campos. Fractionation and separation of peptides with antioxidant and angiotensin-i converting enzyme inhibitory activities from a quinoa (Chenopodium quinoa Willd.) protein hydrolysate. Journal of microbiology, biotechnology and food sciences 12 (1), e2686-e2686. https://doi.org/10.55251/jmbfs.2686
D Olivares, M García-Rojas, PA Ulloa, A Riveros, R Pedreschi, R Campos-Vargas, C Meneses, B G Defilippi. Response Mechanisms of “Hass” Avocado to Sequential 1–methylcyclopropene Applications at Different Maturity Stages during Cold Storage. Plants 11 (13), 1781. https://doi.org/10.3390/plants11131781
R Pedreschi, E Ponce, I Hernández, C Fuentealba, A Urbina, JJ González-Fernández, JI Hormaza, D Campos, R Chirinos, En Aguayo. Short vs. long-distance avocado supply chains: life cycle assessment impact associated to transport and effect of fruit origin and supply conditions chain on primary and secondary metabolites. Foods 11 (12), 1807. https://doi.org/10.3390/foods11121807
I Serrano-García, E Hurtado-Fernández, JJ Gonzalez-Fernandez, JI Hormaza, Romina Pedreschi, Patricia Reboredo-Rodríguez, María Figueiredo-González, Lucía Olmo-García, Alegría Carrasco-Pancorbo. Prolonged on-tree maturation vs. cold storage of Hass avocado fruit: changes in metabolites of bioactive interest at edible ripeness. Food Chemistry, 133447. https://doi.org/10.1016/j.foodchem.2022.133447
C Fuentealba, J Vidal, C Zulueta, E Ponce, V Uarrota, BG Defilippi, Romina Pedreschi. Controlled Atmosphere Storage Alleviates Hass Avocado Black Spot Disorder. Horticulturae 8 (5), 369. https://doi.org/10.3390/horticulturae8050369
CP Beyer, C Barrientos-Sanhueza, E Ponce, R Pedreschi, IF Cuneo, J E Alvaro. Differential Hydraulic Properties and Primary Metabolism in Fine Root of Avocado Trees Rootstocks. Plants 11 (8), 1059. https://doi.org/10.3390/plants11081059
G Nuñez-Lillo, E Ponce, JE Alvaro, D Campos, C Meneses, R Campos-Vargas, S Carpentier, C Fuentealba, R Pedresci. Proteomics analysis reveals new insights into surface pitting of sweet cherry cultivars displaying contrasting susceptibility. The Journal of Horticultural Science and Biotechnology, 1-11. https://doi.org/10.1080/14620316.2022.2056088
D Campos, D García‐Ríos, A Aguilar‐Galvez, R Chirinos, R Pedreschi. Comparison of conventional and ultrasound‐assisted extractions of polyphenols from Inca muña (Clinopodium bolivianum) and their characterization using UPLC–PDA‐ESI –Q/TOF–MSn technique. Journal of Food Processing and Preservation 46 (3), e16310. https://doi.org/10.1111/jfpp.16310
I Hernández, V Uarrota, C Fuentealba, D Paredes, BG Defilippi, R Campos-Vargas, G Nuñez, Esther Carrera, C Meneses, M Hertog, R Pedreschi. Transcriptome and hormone analyses reveals differences in physiological age of ′Hass′ avocado fruit. Postharvest Biology and Technology 185, 111806. https://doi.org/10.1016/j.postharvbio.2021.111806
F Pedreschi, J Matus, A Bunger, R Pedreschi, NL Huamán-Castilla, MS Mariotti-Celis. Effect of the Integrated Addition of a Red Tara Pods (Caesalpinia spinosa) Extract and NaCl over the neo-formed contaminants content and sensory properties of crackers. Molecules 27 (3), 1020. https://doi.org/10.3390/molecules27031020
VG Uarrota, R Pedreschi. Mathematical modelling of Hass avocado firmness by using destructive and non-destructive devices at different maturity stages and under two storage conditions. Folia Horticulturae, 34(2): 1–12. https://doi.org/10.2478/fhort-2022-0011
T Dussarrat, S Prigent, C Latorre, S Bernillon, A Flandin, FP Díaz, C Cassan, P Van Delft, D Jacob, K Varala, J Joubes, Y Gibon, D Rolin, RA Gutiérrez, P Pétriacq. Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience. New Phytologist 234 (5), 1614-1628. https://doi.org/10.1111/nph.18095
L Lamig, S Moreno, JM Álvarez, RA Gutiérrez. Molecular mechanisms underlying nitrate responses in plants. Current Biology 32 (9), R433-R439. https://doi.org/10.1016/j.cub.2022.03.022
O Contreras-López, EA Vidal, E Riveras, JM Alvarez, TC Moyano, EE Sparks, J Medina, A Pasquino, PN Benfey, GM Coruzzi, RA Gutiérrez. Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate. Proceedings of the National Academy of Sciences 119 (4), e2107879119. https://doi.org/10.1073/pnas.2107879119
C Bolatto, S Nieves, A Reyes, S Olivera-Bravo, V Cambiazo. Patched-Related Is Required for Proper Development of Embryonic Drosophila Nervous System. Frontiers in Neuroscience 16. https://doi.org/10.3389/fnins.2022.920670
Books
Bitar, N., Donoso, S., Maass, A. 2022. Distortion in Automorphisms of Expansive Systems. In: Adamatzky, A. (eds) Automata and Complexity. Emergence, Complexity and Computation, vol 42. Springer, Cham. https://doi.org/10.1007/978-3-030-92551-2_3
Gil Eshel, Viviana Araus, Soledad Undurraga, Daniela C. Soto, Carol Moraga, Alejandro Montecinos, Tomás Moyano, Jonathan Maldonado, Francisca P. Díaz, Kranthi Varala, Chase W. Nelson, Orlando Contreras-López, Henrietta Pal-Gabor, Tatiana Kraiser, Gabriela Carrasco-Puga, Ricardo Nilo-Poyanco, Charles M. Zegar, Ariel Orellana, Martín Montecino, Alejandro Maass, Miguel L. Allende, Robert DeSalle, Dennis W. Stevenson, Mauricio González, Claudio Latorre, Gloria M. Coruzzi and Rodrigo A. Gutiérrez. Plant ecological genomics at the limits of life in the Atacama Desert. PNAS. 118 (46). https://doi.org/10.1073/pnas.210117711
Paulina García-González, Fabián Tempio, Camila Fuentes, Consuelo Merino, Leonardo Vargas, Valeska Simon, Mirliana Ramirez-Pereira, Verónica Rojas, Eduardo Tobar, Glauben Landskron, Juan Pablo Araya, Mariela Navarrete, Carla Bastias, Rocío Tordecilla, Macarena A. Varas, Pablo Maturana, Andrés E. Marcoleta, Miguel L. Allende, Rodrigo Naves, Marcela A. Hermoso, Flavio Salazar-Onfray, Mercedes Lopez, María Rosa Bono, and Fabiola Osorio. Dysregulated Immune Responses in COVID-19 Patients Correlating With Disease Severity and Invasive Oxygen Requirements. Frontiers in Immunology, 12. doi: 10.3389/fimmu.2021.769059
Paredes-Zuniga Susana, Ormeno Fernando, Allende, Miguel L. Triadimefon triggers circling behavior and conditioned place preference/ aversion in zebrafish in a dose dependent manner. Neurotoxicology and Teratology, 86. doi: 10.1016/j.ntt.2021.106979
Jaime R. Rau, Nicolás Lagos, Rodrigo Villalobos, Juliana A. Vianna, Cayetano Espinosa-Miranda, Agustín Iriarte. The spatial and trophic ecology of culpeo foxes (Lycalopex culpaeus) in the high Andes of northern Chile. Studies on Neotropical Fauna and Environment. doi:10.1080/01650521.2021.2005393
Sree Rohit Raj Kolora, Gregory L. Owens, Alexander Stubbs, Kamalakar Chatla, Connor Jainese, Katelin Seeto, Merit McCrea, Juliana A. Vianna, Doris Bachtrog, Katherine Maslenikov, James Orr, Milton Love, Peter H. Sudmant. Origins and evolution of extreme lifespan in the adaptive radiation of Pacific rockfishes. Science. 374 (6569): 842-847. DOI: 10.1126/science.abg5332
Pizarro, E., Mora, M., Medina-Vogel, G., Vianna JA. Surviving despite reduce MHC variation: selection patterns and genetic variation of the endangered Huillín (Lontra provocax). Mammal Research 66(4). DOI: 10.1007/s13364-021-00594-3
Weinberg C, Vianna JA, Marquet P, Faugeron S. The South American sea lion, Otaria flavescens, is genetically structured by historical climate changes and contemporary dynamics. Diversity and Distribution.
https://doi.org/10.1111/ddi.13421
Frugone MJ, Cole TL, López ME, Clucas G, Matos-Maraví P, Lois NA, Pistorius P, Bonadonna F, Trathan P, Polanowski A, Wienecke B, Raya-Rey A, Pütz K, Steinfurth A, Bi K, Y. Wang-Claypool C, Bowie RCK, Waters JM, Poulin E, Vianna JA. Taxonomy based on limited genomic markers may underestimate species diversity of rockhopper penguins and threaten their conservation. Diversity and Distribution. https://doi.org/10.1111/ddi.13399
Klemens Pütz, Camila Gherardi-Fuentes, Pablo García-Borboroglu, Claudia Godoy, Marco Flagg, Julieta Pedrana, Juliana Vianna, Alejandro Simeone, Benno Lüthi. Exceptional Foraging Plasticity In King Penguins (Aptenodytes patagonicus) From a Recently Established Breeding Site In Tierra Del Fuego, Chile. Global Ecology and Conservation. Volume 28, August 2021, e01669. https://doi.org/10.1016/j.gecco.2021.e01669
Sophia Di Cataldo, Aitor Cevidanes, Dr; Claudia Ulloa-Contreras; Irene Sacristán; Ezequiel Hidalgo-Hermoso; Valeria Gargano; Nicole Sallaberry-Pincheira; Diego Peñaloza-Madrid; Daniel González-Acuña; Constanza Napolitano; Juliana Vianna; Gerardo Acosta-Jamett; Domenico Vicari; Javier Millán. Mapping the distribution and risk factors of Anaplasmataceae in wild and domestic canines in Chile using molecular and serological methods. Ticks and Tick-borne Diseases. 2021, 12(5):101752 DOI: 10.1016/j.ttbdis.2021.101752
Sophia Di Cataldo, Aitor Cevidanes, Claudia Ulloa-Contreras, Irene Sacristán, Diego Peñaloza-Madrid, Juliana Vianna, Daniel González-Acuña, Nicole Sallaberry-Pincheira, Javier Cabello, Constanza Napolitano, Ezequiel Hidalgo-Hermoso, Gerardo Acosta-Jamett, Javier Millán. Widespread Infection with Hemotropic Mycoplasmas in Free-Ranging Dogs and Wild Foxes Across Six Bioclimatic Regions of Chile. Microorganisms. 2021 Apr 24;9(5):919. doi: 10.3390/microorganisms9050919.
Doussang D, Sallaberry-Pincheira N, Cabanne GS, Lijtmaer DA, González-Acuña D, Vianna JA. Specialist versus Generalists parasites: the interaction between host diversity, environment and geographic barriers in avian malaria. International Journal for Parasitology. Available online 25 May 2021. https://doi.org/10.1016/j.ijpara.2021.04.003
Rocío Álvarez-Varas, Noemi Rojas-Hernández, Maike Heidemeyer, Cynthia Riginos, Hugo A. Benítez, Raúl Araya-Donoso, Eduardo Reséndiz, Mónica Lara-Uc, Daniel A. Godoy, Juan Pablo Muñoz-Pérez, Daniela E. Alarcón-Ruales, Joanna Alfaro-Shigueto, Clara Ortiz-Alvarez, Jeffrey C. Mangel, Juliana A. Vianna and David Véliz. 2021. Green, yellow or black? Genetic differentiation and adaptation signatures in a highly migratory marine turtle. Proceedings of the Royal Society B. 288 (1954) https://doi.org/10.1098/rspb.2021.0754
Acosta I, Cabanne GS, Noll D, González-Acuña D, Pliscoff P, Vianna JA. 2021. Patagonian glacial effects on the endemic Green-backed Firecrown, Sephanoides sephaniodes (Ave: Trochilidae): evidences from species distribution models and molecular data. Journal of Ornithology. 162:289–301. https://doi.org/10.1007/s10336-020-01822-4
Alvarez-Varas R, Heidemeyer M, Riginos C, Benitez H, Reséndiz E, Lara-Uc M, Godoy D, Muñoz-Pérez J, Alarcón-Ruales D, Vélez-Rubio G, Fallabrino A, Piovano S, Alfaro-Shigueto J, Ortiz-Álvarez C, Mangel J, Esquerre D, Zárate P, Medrano C, Vianna JA, Veliz D. 2021. Integrating morphological and genetic data at different spatial scales in a cosmopolitan marine turtle species: challenges for management and conservation. Zoological Journal of Linnean Society. 191(2):434–453, https://doi.org/10.1093/zoolinnean/zlaa066
Chávez, Myra N.; Morales, Rodrigo A.; López-Crisosto, Camila; Roa, Juan Carlos; Allende, Miguel L.; Lavandero, Sergio. Autophagy Activation in Zebrafish Heart Regeneration. Scientific Reports. 10 (1) 10.1038/s41598-020-59106-z
Rojas-Benítez, Diego; L. Allende, Miguel. 2020. Elongator Subunit 3 (Elp3) Is Required for Zebrafish Trunk Development. international journal of Mole 21 (3) 10.3390/ijms21030925
Varas, Macarena A.; Muñoz-Montecinos, Carlos; Kallens, Violeta; Simon, Valeska; Allende, Miguel L.; Marcoleta, Andrés E.; Lagos, Rosalba. Exploiting Zebrafish Xenografts for Testing the in vivo Antitumorigenic Activity of Microcin E492 Against Human Colorectal Cancer Cells. FRONTIERS IN MICROBIOLOGY 11 10.3389/fmicb.2020.00405
Vianna JA, Fernandes FAN, Frugone MJ, Figueiró H, Luis R. Pertierra, Daly Noll, Ke Bi, Cynthia Y. Wang-Claypool, Andrew Lowther, Patricia Parker, Celine Le Bohec, Francesco Bonadonna, Barbara Wienecke, Pierre Pistorius, Antje Steinfurth Christopher Burridge, Gisele P. M. Dantas, Elie Poulin, W. Brian Simison, Jim Henderson, Eduardo Eizirik, Mariana F. Nery, Rauri C. K. Bowie. Genome-wide analyses reveal drivers of penguin diversification. PNAS. 117 (36) 22303-22310. https://doi.org/10.1073/pnas.2006659117
Pertierra LR, Segovia NI, Noll D, Martinez PA, Pliscoff P, Barbosa A, Aragón P, Raya Rey A, Pistorius P, Trathan P, Polanowski A, Bonnadonna F, Le Bohec C, Bi K, Wang-Claypool CY, Gonzalez-Acuña D, Dantas GPM, Bowie RCK, Poulin E, Vianna JA. 2020. Cryptic speciation in gentoo penguins is driven by geographic isolation and regional marine conditions: unforeseen vulnerabilities to global change. Diversity and distribution. 26(8):958-975 DOI: 10.1111/ddi.13072
Lois NA, Campagna L, Balza U, Polito MJ, Pütz K, Vianna JA, Morgenthaler A, Frere E, Sáenz‐Samaniego R, Raya Rey A, Mahler B. 2020. Metapopulation dynamics and foraging plasticity in a highly vagile seabird, the southern rockhopper penguin. Ecology and Evolution. 10(7): 3346-3355.
Levy H., Fiddaman S.R., Vianna JA, Noll D., Clucas G.V, Sidhu J.K.H., Polito M.J., Bost C.A., Phillips R.A., Crofts S., Miller G.D., Pistorius P., Bonnadonna F., Le Bohec C., Barbosa A.A., Trathan P., Raya Rey A, Frantz L.A.F., Hart T, Smith A.L., Evidence of pathogen-induced immunogenetic selection across the large geographic range of a wild seabird, Molecular Biology and Evolution, , msaa040, https://doi.org/10.1093/molbev/msaa040
Cuevas E., Vianna JA, Botero-Delgadillo E., Doussang E., González-Acuña D., Barroso O., Rozzi R., Vásquez R.A., Quirici V. (2020) Latitudinal gradients of haemosporidian parasites: Prevalence, diversity and drivers of infection in the Thorn-tailed Rayadito (Aphrastura spinicauda), International Journal for Parasitology: Parasites and Wildlife, 11: 1-11, https://doi.org/10.1016/j.ijppaw.2019.11.002
González B.A., Agapito A.M., Novoa-Muñoz F., Vianna J., Johnson W.E., Marín J.C. (2020) Utility of genetic variation in coat color genes to distinguish wild, domestic and hybrid South American camelids for forensic and judicial applications. Forensic Science International: Genetics, 45, 102226, https://doi.org/10.1016/j.fsigen.2019.102226.
Cole T.L., Dutoit L., Dussex N., Hart H., Alexander A:, Younger J.L., Clucas G.V., Frugone M.J., Cherel Y., Cuthbert R., Ellenberg U. , Fiddaman S.R., Hiscock J., Houston D., Jouventin P., Mattern T., Miller G., Miskelly C., Nolan P., Polito M.J., Quillfeldt P., Ryan P.G., Smith A., Tennyson A.J.D., Thompson D., Wienecke B., Vianna J.A., Waters J.M. (2019) Receding ice drove parallel expansions in Southern Ocean penguins. Proceedings of the National Academy of Sciences Dec 2019, 116(52): 26690-26696; DOI: 10.1073/pnas.1904048116
Doussang, D., González-Acuña, D., Torres-Fuentes, L.G., Stephen C. Lougheed S.C., Clemente-Carvalho R.B., Kian Greene K. C., Vianna J.A. (2019) Spatial distribution, prevalence and diversity of haemosporidians in the rufous-collared sparrow, Zonotrichia capensis. Parasites Vectors 12:2. https://doi.org/10.1186/s13071-018-3243-4
Frugone, M. J., López, M. E., Segovia, N. I., Cole, T. L., Lowther, A., Pistorius, P., & Polanowski, A. Wieneckeo B., Bi K., Wang-Claypool C.Y., Watersg J.M., Bowie R.C.K, Poulin E:, Vianna J.A. (2019). More than the eye can see: Genomic insights into the drivers of genetic differentiation in Royal/Macaroni penguins across the Southern Ocean. Molecular phylogenetics and evolution, 139, 106563
Dantas G.P.M.,Oliveira L.R., Santos A.M., Flores M.D.,de Melo D.R.,Simeone A., González-Acuña D., Luna-Jorquera D., Le Bohec C., Valdés-Velásquez A., Cardeña M., Morgante S.J., Vianna J.A. (2019) Uncovering population structure in the Humboldt penguin (Spheniscus humboldti) along the Pacific coast at South America. PLoS ONE 14(5): e0215293. https://doi.org/10.1371/journal.pone.0215293
Bernal, Ximena E. et al. Empowering Latina scientists. Science. Washington: Amer Assoc Advancement Science, v. 363, n. 6429, p. 825-826, 2019. Carta de opinion en Science.
Frugone, M. J., Lowther, A., Noll, D., Ramos, B., Pistorius, P., Dantas,G. P. M. Dantas, M. V. Petry, F. Bonadonna, A. Steinfurth, A. Polanowski, A. Raya Rey, N. A. Lois, K. Pütz, P. Trathan, B. Wienecke, E. Poulin & J. A. Vianna (2018). Contrasting phylogeographic pattern among Eudyptes penguins around the Southern Ocean. Scientific reports, 8(1), 17481.
Alvares-Varas R, Morales-Moraga D, González-Acuña D, Klarian SA, Vianna JA. 2018. Mercury exposure in Humboldt (Spheniscus humboldti) and chinstrap (Pygoscelis antarctica) penguins throughout Chilean coast and Antarctica. Archives of Environmental Contamination and Toxicology. 75(1):75-86. doi: 10.1007/s00244-018-0529
Isidora Mura-Jornet; Carolina Pimentel; Gisele PM Dantas; María Virginia Petry; Daniel González-Acuña; Andrés Barbosa; Andrew D Lowther; Kit M Kovacs; Elie Poulin; Juliana A. Vianna. 2018. Chinstrap penguin population structure: one or more populations along the Southern Ocean? BMC Evolutionary Biology. Mura-Jornet et al. BMC Evolutionary Biology. 18:90. https://doi.org/10.1186/s12862-018-1207-0
Dantas GPM, Maria GC, Marasco ACM, Castro LT, Almeida VS, Santos FR, Oliveira LR, Crespo E, Frere E, Milliones C, González Acuña D, Morgante JS, Vianna JA. 2018. Demographic history of the Magellanic Penguin (Spheniscus magellanicus) on the Pacific and Atlantic coasts of South America. Journal of Ornithology 1-13. https://doi.org/10.1007/s10336-018-1538-z
Ramos B., González-Acuña D., Loyola, D.E., Johnson W.E., P. G. Parker, M. Massaro, G. P. M. Dantas, M. D. Miranda, J. A. Vianna. 2018. Landscape genomics: natural selection drives the evolution of mitogenome in penguins. BMC Genomics. 19:53.
Mora M, Medina-Vogel G, Sepúlveda MA, Noll D, Álvarez-Varas R, Vianna JA. 2018. Genetic structure of introduced American mink (Neovison vison) in Patagonia: colonization insights and implications for control and management strategies. Wildlife Research 45(4) 344-356 https://doi.org/10.1071/WR18026
Vianna JA, Noll D, Mura-Jornet I, Valenzuela-Guerra P, González-Acuña D, Navarro C, Loyola DE, Dantas GPM. 2017. Comparative genome-wide polymorphic microsatellite markers in Antarctic penguins via next generation sequencing. Genetics and Molecular Biology. 40 (3):676-687.
Álvarez-Varas R, Contardo J, Heidemeyer M, Forero-Rozo L, Brito B, Cortés V, Brain MJ, Pereira S, Vianna JA. 2017. Ecology, health and genetic characterization of the southernmost green turtle (Chelonia mydas) aggregation in the Eastern Pacific: implications for local conservation strategies. Lat. Am. J. Aquat. Res., 45(3): 540-554.
Vianna JA, Noll D, Dantas GPM, Petry MV, Barbosa A, González-Acuña D, Le Bohec C, Bonnadona F, Poulin E. 2017. Marked phylogeographic structure of Gentoo penguin reveals an ongoing diversification process along the Southern Ocean. Molecular Phylogenetics and Evolution. 107: 486-498.
Vianna JA, Noll D, Moreno L, Silva C, Muñoz-Leal S, Najle M, González-Acuña D. 2017. Record of an alleged extinct rodent: molecular analyses of the endemic Octodon pacificus from Chile. Journal of Mammalogy, 98(2):456-463.
Sallaberry-Pincheira N, González-Acuña D, Padilla P, Dantas GPM, Luna-Jorquera G, Frere E, Valdés-Velásquez A, Vianna JA. 2016. Contrasting patterns of selection between MHC I and II across populations of Humboldt and Magellanic penguins. Ecology and Evolution. 6(20):7498-7510.
Santos FA, Morgante JS, Frere E, Milliones A, Sander M, Vianna JA, Dantas GPM. 2016. Evolutionary History of The Kelp Gull (Larus dominicanus) At The South Hemisphere Supported By Multilocus Evidence. Journal of Ornithology. 157: 1103-1113.
Rivera DS, Vianna JA, Ebensperger LA, Palma RE. 2016. Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae) based on mitochondrial DNA. Zoological Journal of the Linnean Society. 178(2):410–430.
Álvarez-Varas R, González-Acuña D, Vianna JA. 2015. Comparative phylogeography and morphological variation of co-distributed Phrygilus species (Birds, Thraupidae) from Central Andes. Molecular Phylogenetics and Evolution. 90: 150-163.
Sallaberry-Pincheira N, Gonzalez-Acuña D, Herrera-Tello Y, Dantas GPM, Luna-Jorquera G, Frere E, Valdés-Velasquez A, Simeone A, Vianna JA. 2015. Molecular epidemiology of avian malaria in wild breeding colonies of Humboldt and Magellanic penguins in South America. Ecohealth. 12(2):267-77.
Vianna JA, Cortes M, Ramos B, Sallaberry-Pincheira N., Daniel González-Acuña, Gisele P. M. Dantas, João Morgante, Alejandro Simeone & Guillermo Luna-Jorquera. 2014. Changes in abundance and distribution of the humboldt penguin Spheniscus humboldti. Marine ornithology. 42:153-159
Fabiola Peña M., Elie Poulin, Gisele P. M. Dantas, Daniel González-Acuña, Maria Virginia Petry, Vianna, JA. 2014. Have Historical Climate Changes Affected Gentoo Penguin (Pygoscelis papua) Populations in Antarctica? Plos One. 9(4):1-8.
Marín, J.C.; Orozco-terWengel, P.; Romero, K.: Vásquez, J.P.; Varas, V.; Vianna J.A. 2014. Cross-amplification of nonspecific microsatellites markers: an useful tool to study endangered/vulnerable species of southern Andes deer. Genetics and Molecular Research 13 (2): 3193-3200.
Valenzuela-Guerra, P.; Morales-Moraga, D.; González-Acuña, D. Vianna, JA. 2013. Geographic morphological variation of Gentoo penguin (Pygoscelis papua) and sex identification: using morphometric characters and molecular markers. Polar Biology. 36:1723–1734.
2006 - 2014
Vianna JA, Cortes M, Ramos B, Sallaberry-Pincheira N., Daniel González-Acuña, Gisele P. M. Dantas, João Morgante, Alejandro Simeone & Guillermo Luna-Jorquera. 2014. Changes in abundance and distribution of the humboldt penguin Spheniscus humboldti. Marine ornithology. 42:153-159
Fabiola Peña M., Elie Poulin, Gisele P. M. Dantas, Daniel González-Acuña, Maria Virginia Petry, Vianna, JA. 2014. Have Historical Climate Changes Affected Gentoo Penguin (Pygoscelis papua) Populations in Antarctica? Plos One. 9(4):1-8.
Marín, J.C.; Orozco-terWengel, P.; Romero, K.: Vásquez, J.P.; Varas, V.; Vianna J.A. 2014. Cross-amplification of nonspecific microsatellites markers: an useful tool to study endangered/vulnerable species of southern Andes deer. Genetics and Molecular Research 13 (2): 3193-3200.
Valenzuela-Guerra, P.; Morales-Moraga, D.; González-Acuña, D. Vianna, JA. 2013. Geographic morphological variation of Gentoo penguin (Pygoscelis papua) and sex identification: using morphometric characters and molecular markers. Polar Biology. 36:1723–1734.
Trinca C.S., Rosas, F.C.W., De Thoisy, B., Waldemarin, H.F., Koepfli, K-P, Vianna, J.A., Eizirik, E. 2012. Phylogeography and demographic history of the Neotropical otter (Lontra longicaudis). Journal of Heredity, 103(4):479–492.
Sallaberry-Pincheira, N.; Garin, C.F.; Gonzalez-Acuña, D.A.; Sallaberry, M.A.; Vianna J.A. 2011. Genetic divergence of Chilean long-tailed snake (Philodryas chamissonis) across latitudes: conservation threats for different lineages. Diversity and Distributions, 17: 152–162.
Fuentes-Hurtado, M.; Marín, J. C.; González-Acuña, D.; Verdugo, C.; Vidal, F.; Vianna, J.A. 2011.Molecular divergence between insular and continental Pudu deer (Pudu puda) populations in the Chilean Patagonia. Studies on Neotropical Fauna and Environment. 46(1): 23–33.
Vianna, J.A.; Medina-Vogel, G.; Chehébar, C.; Olavarría, C.; Sielfeld, V.; Faugeron. S. 2011. Phylogeography of Patagonian otter (Lontra provocax): evidence of adaptive divergence to marine habitat or signature of southern glacial refugia? BMC Evolutionary Biology. 11:53.
Soto-Azat, C., Boher, F., Flores, G., Monsalve, R., Santibáñez, A., Vianna, J. and Medina-Vogel, G. (2011) Veterinary Management of Marine Otters (Lontra felina) in Ecological Studies in Chile. Proceedings of Xth International Otter Colloquium, IUCN Otter Spec. Group Bull. 28A: 114 126
https://www.iucnosgbull.org/Volume28A/Soto-Azat_et_al_2011.html
Silva-Rodríguez, E.; Aleuy, O. A. Fuentes-Hurtado, M.; Vianna, J.A.; Vidal, F.; Jiménez, J.E. 2011. Priorities for the conservation of the pudu (Pudu puda) in southern South America. Animal Production Science. 51:375–377.
Vianna, J.A.; Ayerdi, P.; Medina-Vogel, G.; Mangel, J.C.; Zeballos, H.; Apaza, M.; Faugeron, S. 2010. Phylogeography of the marine otter (Lontra felina): historical and contemporary factors determining its distribution. Journal of Heredity. 101(6):676–689.
Caballero S, Heimeier D, Trujillo F, Vianna J, Barrios Garrido H, Montiel MG, Beltran S, Marmontel M, Santos M, Rossi Santos M. 2010. Initial description of Major Histocompatibility Complex variation at two Class II loci (DQA-DQB) in Sotalia fluviatilis and Sotalia guianensis. Latin American Journal of Aquatic Mammals ISSN: 1676-7497, vol:1 fasc: n/a págs: 1 – 10.
Caballero S, Heimeier D, Trujillo F, Vianna J, Barrios Garrido H, Montiel MG, Beltran S, Marmontel M, Santos M, Rossi Santos, M.; Santos, F. 2010. Mitochondrial DNA diversity, differentiation and phylogeography of the South American riverine and coastal dolphins Sotalia fluviatilis and Sotalia guianensis. Latin American Journal of Aquatic Mammals ISSN: 1676-7497, vol:1 fasc: N/A págs: 11 – 20.
Muschett, G.; Bonacic, C.; Vianna, J. A. 2009. A non-invasive sampling method for genetic analysis of the west-indian manatee (Trichechus manatus). Marine Mammal Science. 25(4): 955-963.
Medina-Vogel, G.; Merino, L.O.; Monsalve Alarcón, R.; Vianna, J.A. 2008. Coastal–marine discontinuities, critical patch size and isolation: implications for marine otter conservation. Animal Conservation. 11:57-64.
Caballero, S.; Trujillo, F.; Vianna, J.A.; Barrios-Garrido, H.; Montiel, M.G.; Beltrán-Pedreros, S.; Marmontel, M.; Santos, M.C.O.; Rossi, M.R.; Santos, F.R.; Baker, C.S. 2007. Taxonomic status of South American coastal and riverine dolphins Sotalia spp., with insights into cetacean molecular systematics. Marine Mammal Science. 23(2):358-386.
Vianna, J.A.; Bonde, R.K.; Caballero, S.; Giraldo, J.P.; Lima, R.P.; Clark, A.M.; Marmontel, M.; Morales-Vela, B.; de Sousa, M.J.; Parr, L.; Rodríguez-Lopez, M.; Mignucci-Giannoni, A.A.; Powell, J.;Santos, F.R. 2006. Phylogeography, Phylogeny and Hybridization in trichechids sirenians: implications for manatee conservation. Molecular Ecology, 15:433-447.
